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Hi! Thank you for your helpful reply. If it's ok, I can email the alignment file, since this is still unpublished. Would this be the Smoove VCF file that is...

Thanks! Attached is the list of chromosome sizes, to start with: [chr_sizes_genome.txt](https://github.com/mchowdh200/samplot-ml/files/9682784/chr_sizes_genome.txt) I will gather some of the bams we used and the reference genome and VCF to share with...

P.S. Here are only the lengths for the chromosomes for which there was an error: chr10 21077231 chr1 112674304 chr11 20431416 chr12 19787094 chr13 18021457 chr14 16467355 chr15 14042894 chr17...

I've now emailed all of the requested files. Please let me know if you would like anything else. Thanks so much again!