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                                            gatk-bot

Gg vs 887 streamline vat tsv extract

Github actions tests reported job failures from actions build [6041242949](https://github.com/broadinstitute/gatk/actions/runs/6041242949) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Gg vs 887 streamline vat tsv extract

Github actions tests reported job failures from actions build [6041548152](https://github.com/broadinstitute/gatk/actions/runs/6041548152) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Gg vs 887 streamline vat tsv extract

Github actions tests reported job failures from actions build [6041869902](https://github.com/broadinstitute/gatk/actions/runs/6041869902) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

test java 21

Github actions tests reported job failures from actions build [6906804987](https://github.com/broadinstitute/gatk/actions/runs/6906804987) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

LearnReadOrientationModel loads tables for one ref context at a time, reducing memory demands 32x

Github actions tests reported job failures from actions build [7405843720](https://github.com/broadinstitute/gatk/actions/runs/7405843720) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Reverting the CombineGVCFs and GenotypeGVCFs to the old behavior for no-calls when there are no PLs present.

Github actions tests reported job failures from actions build [7891988613](https://github.com/broadinstitute/gatk/actions/runs/7891988613) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Reverting the CombineGVCFs and GenotypeGVCFs to the old behavior for no-calls when there are no PLs present.

Github actions tests reported job failures from actions build [7905273867](https://github.com/broadinstitute/gatk/actions/runs/7905273867) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment.

Github actions tests reported job failures from actions build [6618531552](https://github.com/broadinstitute/gatk/actions/runs/6618531552) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment.

Github actions tests reported job failures from actions build [6619431291](https://github.com/broadinstitute/gatk/actions/runs/6619431291) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment.

Github actions tests reported job failures from actions build [6619473068](https://github.com/broadinstitute/gatk/actions/runs/6619473068) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...