MING

I saw this issue is close, but I did not see the clear answer to fix this. Does anyone can help? Can't locate Bio/PrimarySeqI.pm in @INC (@INC contains: /path/miniconda3/share/ensembl-vep-88.9-1/modules /path//miniconda3/share/ensembl-vep-88.9-1...

panic:gzip: invalid header

8

I used singullarity to run smoove, but met below info and the job was killed. Do you konw the reason? something wrong with bam header? how to fix this? Thanks...

some errors when do "make"

1

lumpy-sv-0.3.1 gaom4$ make cd lib/htslib && \ ./configure --disable-bz2 --disable-lzma --enable-libcurl checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name......

Hi, I just wonder if FACETS can apply for norrmal sample only without tumor sample to study individual germline copy number. Thanks in advance!