Dr. Kimon Froussios

How is mixed-strand trans-splicing handled?

4

I've been using an old version of gffread bundled with cufflinks 2.2.1 to create the transcript sequences given a GTF and genome FASTA. Recently I stumbled on trans-splicing from transcripts...

Installation failed: error setting certificate verify locations

4

I am failing to install wasabi, and I don't understand why. ``` > biocLite("COMBINE-lab/wasabi") BioC_mirror: https://bioconductor.org Using Bioconductor 3.6 (BiocInstaller 1.28.0), R 3.4.3 (2017-11-30). Installing github package(s) ‘COMBINE-lab/wasabi’ Installation failed:...

### Description of feature I propose that sample names should be checked for validity at the beginning of the run. The aim would be to look for common character errors...