freuv

'Result would be too long a vector' -- running GE KM analysis on BRCA example in manual

8

Hi, I am running the 'Preprocessing of Gene Expression data (IlluminaHiSeq_RNASeqV2)' and 'TCGAanalyze_SurvivalKM: Correlating gene expression and Survival Analysis' R-commands as-is from the Bioconductor page for TCGAbiolinks. However, I run...

Re: Error 127

1

Hi, I am running fermi on 150bp paired-end reads from the HiSeq platform. I generated a makefile and tried to run it using the following command: make -f ../path_to/assemble.mak -j...

Empty tabsurvKM and tabsurvKMcomplete output with survivalKM analysis

1

Hi, Running the survivalKM analysis as instructed on the bioconductor tutorial on the BRCA data yields empty output, and the following standard output: 1 of 0 8.7.6.5.4.3.2.1.0.0 of 0 8.7.6.5.4.3.2.1.0.>