Felipe Marques de Almeida

icon indicating a website link https://fmalmeida.github.io/ icon indicating an email [email protected]

icon company University of Brasilia @compgenunb icon location I am just a fascinated bioinformatician who loves to learn.

Results 34 issues of Felipe Marques de Almeida

Update NanoPack tools alternatives

Some tools from NanoPack have been replaced for quicker tools as described here: https://github.com/wdecoster/nanopack?tab=readme-ov-file The task would be to update such tools in the pipeline.

enhancement

[BUG] Wrong coordinates in results

12 comment

**Describe the bug** Hi, First thanks for the nice work on this tool. I have been using this tool in a pipeline of mine and it has been working awesomely....

bug

Problem when pipeline param is the same as nf-test param

Hi, I am currently having a problem that is as follows. I have a pipeline which as a parameter `outputDir` that defaults to `./`. This variable also exists for nf-test,...

run nf-test with awsbatch executor

4 comment

Hy dev team, Thanks for this nice tool. When trying to execute nf-test with `awsbatch` it failes with: ```console Nextflow stderr: When using `awsbatch` executor an S3 bucket must be...