nf-test
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Problem when pipeline param is the same as nf-test param
Hi,
I am currently having a problem that is as follows.
I have a pipeline which as a parameter outputDir
that defaults to ./
.
This variable also exists for nf-test, but defaults to output
.
When running nf-tests, it fails because it cannot find any outputs. The pipeline wrote in ./
and nf-test is looking at output
.
Did anything change on how nf-test solves it? This problem happens with the latest nf-test version but it works properly with version 0.7.3
.
I have also tried adding the following in the shared .nf-test.config
:
params {
outputDir = 'output'
}
But it does not work as well.