Florian M

Allow sharing datasets across organizations of the same instance.

When creating an annotation on a dataset with fallback segmentation layer, the annotation layer currently gets the whole bbox of the dataset. It should be the fallback layer’s bbox instead.

Currently, only a subset of the codecs in a zarr.json is actually applied. We should make sure that all codecs are actually applied in order. Subissues: - [ ] https://github.com/scalableminds/webknossos/issues/7116...

Support loading meshes from remote neuroglancer datasets

1

#6716 introduces support for neuroglancer datasets. We should also be able to fetch existing meshes. Compare implementation in webknossos-connect

After #7528 the wkw shards are no longer opened with memory mapping, so they don’t need to be closed when they are removed from the cache. We can probably use...

`findAllListableExplorationals` and its use of different access queries has gotten quite convoluted. Maybe a couple of renamings would already help. Compare comment at https://github.com/scalableminds/webknossos/pull/7563#discussion_r1455952002

Let’s think about what’s needed where and what names make the most sense See discussions at https://scm.slack.com/archives/C5AKLAV0B/p1700831539308049?thread_ts=1697184159.482769&cid=C5AKLAV0B and https://github.com/scalableminds/webknossos/pull/7395#issuecomment-1893357111

wk.Annotation constructor should require organization name

2

When creating a new annotation via `a = wk.Annotation(name, dataset_name=dataset_name, voxel_size=voxel_size)` it should be required to pass an organization name for the specified dataset to avoid ambiguity. Otherwise during upload...

Writing a small data shape to a compressed Zarr3 array seems to be significantly slower than for WKW: ``` Writing shape (24, 24, 24) to zarr3 mag... took 2.5s Writing...

Conversion job 6516f962010000cd03861817 of a tiff file failed with this stack trace ``` File "/usr/local/lib/python3.11/site-packages/webknossos/dataset/_utils/pims_images.py", line 495, in copy_to_view with self._open_images() as images: File "/usr/local/lib/python3.11/contextlib.py", line 137, in __enter__ return...