Philipp A.

@davidsebfischer has a solution for that. It wasn’t generally applicable, but I forgot why. In any case, he could probably outline to you how to do it with a few...

For now as a code snippet here to help @veda11391 fast, but if we can include it in anndata in a generic enough way, it would be great to have...

Sure, but can we have some code block in this issue that helps someone stumbling upon this issue?

What do you expect to work which doesn’t? Some specific examples would be nice. Is this about indexing using a `pandas.MultiIndex` instance and that doesn’t behave as expected or do...

See also theislab/scanpy#650

For the time being, we should at least raise a better error message than the technical one people get now. Maybe just `raise NotImplementedError('filter_genes does not yet(?) work in backed...

Thanks for this! We’ll probably get to this next week when Ilan is back from holiday. Fix for the pandas stuff is in the pipes: https://github.com/scverse/anndata/pull/2133

The issue is that it renders widgets even if widget state isn’t recorded. Widget View `execution_result`s/`display_data` should be ignored in favor of other mime types if there’s no recorded widget...

Hi! can you give us an overview what’s in the old object vs the new one? for each of `X`, `layers`, `obs[*]`, `obsm[*]`, `var[*]`, `varm[*]`, `uns[*][*]...` following, wherever there are...

Yes, the compression… gzip should be *very fast* usually but [the docs say](http://docs.h5py.org/en/stable/high/dataset.html#lossless-compression-filters) it it’s “moderate speed”. Maybe their implementation isn’t good. **However** they also say: > #### LZF filter...