Laura Hughes

sad!

lookupSublineages("Omicron") right now is missing all the XBB lineages since it's not pulling recombinant lineages.

Info on [contributing packages](https://bioconductor.org/developers/)

genomics locations: can't get to a particular location

2

`b117_nyc = getPrevalence(pangolin_lineage = "B.1.1.7", location="New York")` ... if you know you want to look at the county New York, there's no way to access this info without going through...

e.g. Omicron should also include all recombinants which are recombinants of BA.1 and BA.2 (any Omicron lineage x Omicron lineage)

Better error message for bad inputs to getLocationData

1

`getLocationData("California", "India")` fails with message `Error in pb_tick(self, private, len, tokens) : !self$finished is not TRUE`

ugh. :( `getResourcesData(query = 'seroprevalence OR "sero-prevalence"', fetchAll = TRUE)` --> ``` Error: Can't combine `..1$license` and `..2$license` . ``` `license` is a list in some cases and string in...

`jsonlite::fromJson` --> `RcppSimdJson::fparse` also remove jsonlite as pkg dependency

searchLocations needs a better example

1

`searchLocations(c("California", "Florida", "Texas"), admin_level=1)` which returns `"California" "Florida" "Texas" ` seems not particularly useful.

`x = getEpiData(name = c("Los Angeles-Long Beach-Anaheim", "Detroit-Warren-Dearborn, MI", "New Orleans-Metairie, LA"))` -- > LA gets dropped ``` x = getEpiData(name = c("Los Angeles-Long Beach-Anaheim, CA", "Detroit-Warren-Dearborn, MI", "New Orleans-Metairie,...