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Access Orbitrap data in R lang using C# mono assembly - bioconductor package
Hello There, I want to use auc.rawrrChromatogram to calculate area under the curve. However, not all of my peaks are 'clean' and some may have coelution issues. Any suggestions on...
I have created a Docker container based on [`rocker/r2u`](https://eddelbuettel.github.io/r2u/) for my statistical analyses. Unfortunately, `rawrr` is not included in the [pool of `r2u` packages](https://r2u.stat.illinois.edu/ubuntu/pool/dists/jammy/main/) and therefore has to be installed...
Hello! I would like to suggest a little bit more informative output for `rawrr:::auc.rawrrChromatogram` fucntion. For instance with observed RT and mz, something like: ``` XIC generated from 20230525_QCN1_001_03.raw consisting...
S rawrr::readSpectrum(scan = 1:9) Error in if (rvs != "No RAW file specified!") { : the condition has length > 1 Can you tell me how to deal with it
Hi there, if i see correct, Read_Spectra returns a list of all the scans entered. Is there a way to get a Summed/Average_Spectra like Xcalibur or Freestyle do? When I...
Dear all, is there a way of accessing the S/N values from a readSpectrum-Object? I cant seem to find the info in the list. Thanks
refactor `rawDiag::readScans()` ### arguments rawfile : path to raw file scans : numeric vector for selection based on scan index filter : scan filter for logical selection of scans (e.g....
- http://fgcz-ms.uzh.ch/~cpanse/talks/20211123-rawrrRcpp_MetaRbolimics2021.html - https://github.com/mono/mono/issues/21320 - code snippets: https://github.com/cpanse/rawrrRcpp - https://github.com/cpanse/mono.issue.21320
Each raw file header contains a detector list. c# methods are: ``` int GetInstrumentCountOfType (Device type) Device GetInstrumentType(int index); int InstrumentCount { get; } ``` see page 17 of UsingRawFileReader....