SlicerTomoSAM
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fedesemeraro
An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging techniques.
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[Qt] qMRMLSliceView::sliceViewInteractorStyle is deprecated. Use interactorObserver instead. Error occuring when trying to include mask points in the image. Seems to be using a depecrated version in Slicer?
Suggestion to force casting into 'uint8' to 'create_embeddings' function in 'tomosamLogic.py'
I am trying to create the Embeddings file using 3DSlicer's user-interface, but I get the following error "TypeError: Input type int32 is not supported". Could you please let me know...
The recently published paper presents a SAM specifically for medical images. https://github.com/bowang-lab/MedSAM Wondered if it is trivial to switch existing SAM to this MedSAM? Thank you for your time!
Thank you for creating this nice extension, it works really great! One problem that I have, however, is the following: Sometimes I am not happy with the results of the...
I am try MRI image file (nii). Embedding successfully. The python console shows "Create SAM predictor ... Done Reading Embedding ... Done Reading Image ... Done" When I click on...
I downloaded data from the TCIA / IDC C4KC-KiTS dataset and loaded a CT series. I got the error below. The int16 data type is very common for real world...
Mentions the version number of 3D Slicer since earlier versions do not have TomoSam extension. Solved issue #9
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An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging techniques.