Marcus Fedarko

Results 76 comments of Marcus Fedarko

It can also be a problem with "real" names, unfortunately -- @lisa55asil brought this up in the context of Qurro a while back, there's fun stuff like [_P. gingivalis_](https://en.wikipedia.org/wiki/Porphyromonas_gingivalis) and...

I think you should be able to just use [`@click.version_option()`](https://click.palletsprojects.com/en/7.x/api/#click.version_option) in https://github.com/biocore/DEICODE/blob/master/deicode/scripts/_standalone_rpca.py (importing the current version string from [`deicode.__init__`](https://github.com/biocore/DEICODE/blob/master/deicode/__init__.py)) to do this. ...I should probably add this to Qurro also...

Thanks @gibsramen. Agreed that this would be a really useful feature to have. Adding UI controls to the continuous coloring sections that let the user define the exact "domain" of...

"issue #500" hits different :pensive:

Thank you both! I think the reason for the node circles appearing is that, as Kalen mentioned, we recently (haven't officially released a new version since) updated EMPress so that...

Thanks everyone for the helpful feedback. I find I agree with @jwdebelius' perspective on this: as I understand it, the eventual rewrite of EMPress' codebase will supersede any solution to...

Alright, this PR should now work like before! @jwdebelius / @mortonjt / anyone else interested, would you mind testing this out? The changes involved were relatively small, but this PR...

Thanks both! @ElDeveloper, I've merged the upstream changes from #555 into this PR, so the tests should now pass. However, I think the tree coloring update buttons being broken (documented...

Thanks @ElDeveloper. Getting back to #484 is on my list, but I don't have time to review everything there right now -- I'll set aside some time this Tuesday to...

Fair enough! Since there's a compelling reason for it, I don't mind this change. > I think that small convenience is outweighed by the possible frustration of having to search...