olga

Ok, thank you. So I need to check why this is happening. With other regions, however, it works fine.

Hello @jokergoo I checked my Matrix. Mat_kod8 was converted into a Matrix readable in enrichedHeatmap using your function as.normalizedMatrix(). It does a kind of normalization, but I suppose that It...

Ho! Thank you very much! Just another question Is: Is It possibile to color the trajectory by Cell types (clusterization generates by Seurat?) or Is It Just a gene ordering...

Hi, thank you for you answer. Im new on python because I usually use R. I used loom files with clustering and dimensionality reduction imported from my Seurat obj. However,...

Of course. I have a dataset of 9000 cells (5 clusters) composed of ~5000 wild type and ~4000 knock out. I have barcode ids, metadata and clustered Cell id. I...

i am interested in `dyn.pd.fate() ` . how can visualize the results in both conditions?

Thank you, I've tried It, great result!! However, I would also.compare acceleration of some genes in different conditions. There Is a way to compare the scale values? I noticed that...

Dear @Sichao25, I produced acceleration plot for One gene "POSTN" in WT and in ko dataset. Acceleration value in WT Is 0.008 and in Ko Is 0.015. the scale are...

ok, that's fine. Last question for you: is it possible to do the animation picture (with the cells that move themselves along a trajectory) using as umap background the umap...

hi @Sichao25 again, another question: in acceleration plot, can I set manually the scale? (xlim,ylim) I would, at least, have the same values. thank you