Fares Azzabi

feat: add --remove-orphaned flag to mani sync command

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### What's Changed This PR implements the `--remove-orphaned` flag for the `mani sync` command, addressing the feature request in issue #108. The implementation provides a safe way to clean up...

Mani sync does not remove projects removed from configuration

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## Is your feature request related to a problem? Please describe When I use `mani sync`, and later archive/remove a project from my mani configuration file, running `mani sync` again...