Fabrice Brito

Results 11 issues of Fabrice Brito

I really like the approach you implemented with: ```python from fastapi import APIRouter, Depends, HTTPException from xpublish.dependencies import get_dataset myrouter = APIRouter() @myrouter.get("/{var_name}/mean") def get_mean(var_name: str, dataset: xr.Dataset = Depends(get_dataset)):...

question

I really like intake-stac and together with xpublish it becomes a very powerful solution :-) 1. Open Assets The example shown in the notebook using Landsat data @AWS is great....

enhancement
discussion

The client id configured requires the client secret. How can we set the client secret?

CUDARequirement supported features is incomplete: ``` supported_features = { 'DockerRequirement': ['class', 'dockerPull'], 'http://commonwl.org/cwltool#CUDARequirement': ['class', 'cudaDeviceCount', 'cudaDeviceCountMin', 'cudaDeviceCountMax'], } ``` see https://github.com/common-workflow-language/cwltool/blob/main/cwltool/extensions.yml

The env variable `CALRISSIAN_POD_NAME` allow discovering the volumes to mount on the spawned pods. This is implemented in class `KubernetesPodVolumeInspector` on the assumption that there's a single container in that...

bug

**Calrissian version** 0.12.0 **Current behaviour:** Parameter `pw` is a secret. using it in an `EnvVarRequirement` with e.g.: ``` EnvVarRequirement: envDef: AWS_ACCESS_KEY_ID: $(inputs.pw) ``` will not take the parameter value. **Expected...

enhancement

CWL foresees: - https://www.commonwl.org/v1.2/Workflow.html#ToolTimeLimit - https://www.commonwl.org/v1.2/CommandLineTool.html#ToolTimeLimit Calrissian doesn't currently support TooltimeLimit, could the kubernetes `activeDeadlineSeconds` field for both JobSpec and PodSpec help supporting this?

enhancement

A trailing slash in the value of the --tmp-outdir-prefix CLI option provide different output results ``` image: ghcr.io/duke-gcb/calrissian/calrissian:0.16.0 command: ["calrissian"] args: - --stdout - /calrissian/results.json - --stderr - /calrissian/app.log -...

bug