Fabio Ticconi

> Having arguments passed at the command line (vs assuming a config file/default directory) is an easy way of self-documenting. It's self-documenting for you the programmer, as it lets the...

To test the following scenario: - setup two GRS, with the second having multiple regions for each one of the first, in mixed order and across 20 chromosomes - sort...

Possible changes to the gProfiler link in the enrichment report, @JuliaGeh ``` gProfilerPrefix = "https://biit.cs.ut.ee/gprofiler/gost?organism=hsapiens&query= gProfilerSuffix = "&ordered=false&all_results=false&no_iea=false&combined=false&measure_underrepresentation=false&domain_scope=annotated&significance_threshold_method=g_SCS&user_threshold=0.05&numeric_namespace=ENTREZGENE_ACC&sources=GO:MF,GO:CC,GO:BP,KEGG,TF,REAC,MIRNA,HPA,CORUM,HP,WP" gProfilerPrefix + "+".join(gene_name_list) + gProfilerSuffix ```

@JuliaGeh please fix enrichment output (genes should not have strand or empty parentheses) ``` TST( ) CACNA1I(-) ```

I've removed the gprofiler link altogether, as the API has changed too much (now it needs a post request). I've tried to fiddle with javascript to send a json POST...

Item templates are almost done - the structure is there and it already works (tested with crafting). What needs to be done is putting the right character and colour for...

Also, it's very important to have a separated palette for terrain, creatures and items (eg, subpalettes defined in yml, so that I can check at startup if there's any overlap)....

http://rgb.to/color/10000/leafy-green

Bark armour was easy; hide armour will be trickier. In the former we simply set the protection values in the item yaml. For hides, we want the protection values to...

The big use case is selecting only a subset of the surrounding entities; using a filter would save a lot of code and quite possibly computation (since right now we...