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rangeSet does not support sex chromosomes

4

I am trying to add coloring and annotation to CNVs using rangeSet but the coloring does not appear on sex chromosomes.

mflevine

Two annotations layouts combined: overlaid + histogram

2

Hey, is it possible to combine two types of the annotations? it would be helpful to draw this: https://eweitz.github.io/ideogram/annotations-overlaid and this: https://eweitz.github.io/ideogram/annotations-histogram on the same picture to make it more...

thedam

Annoatation with multiple tracks

1

Hello, I am try to feed the follow code to the config.annotations in the ideogram ``` var annots = [ { "name": "TP53", "chr": "17", "start": 7687489, "stop": 7668420, "weight":...

cloudyaaron

Is there a way to zoom in or out ideograms to check overlapped annotations?

2

Thanks for this great tool. When multiple annotations are too close together (like within 10000 bases) in one chromosome as shown in , only one of them could be visible....

Tong-Chen

Hey, I want to visualize translocation breaking points. When I try to use this example: https://eweitz.github.io/ideogram/genome-alignment with `human-mouse` I get such picture:  but when I chagne the config code:...

thedam

Custom Genome (json)

1

hello. First, I would like to thank you for your efforts in building a useful ideogram. I am a user who wants to use this ideogram to build a web...

sehee59