stollec

The organism is the honeybee (Apis mellifera, 230 Mb genome, 2 versions I compare to: one older scaffold assembly which is not too bad over all, and since few weeks...

I have the same error about bioperl "ERROR: Bio::Perl not installed, install with cpanm Bio::Perl" I installed Funannotate via conda (current version, v1.8.9) I then tried to install Bioperl manually...

The BioPerl error can be fixed like this (at least in the conda env): activate the funannotate environment ``` cpanm --force Bio::DB::GenBank cpanm Bio::Perl ```

i have the same issue. The INSTALL instructions are really rudimentary for the important parts. I dont know how, I have a configure file now (i typed autoconf which only...

I was just running into the very same problem. In the end I used one of the many bamtools installations coming with another tool (in my case bedtools or WHAM)....