esand93

Thank you for both of your answers! _It is a bit odd that the canonical model was able to train. This indicates that the plasmid has enough sequence diversity containing...

Adding "--tombo-model-filename canonical-model" to the command below solved the issue for building a model! Thank you so much for your help! `tombo build_model estimate_alt_reference --tombo-model-filename canonical-model --alternate-model-filename modification_detection --alternate-model-name mod_base...

When I run the estimate_reference command to train the canonical model, I didn't change the kmer values. As far as I understood, it will then use the default values (upstream-bases...

I tried to reduce the --minimum-test-reads to 1, but I still get the same error. I also checked the position that I try to model has a coverage of 16'000...

Sorry it might have been confusing, and I hope this is not getting more confusing now when I try to explain. I'm actually working with different set of samples. Set...