erosix

Hello, did someone tried to use Harmony on merged objects including more than 200 samples and more than 2 M cells? Which merging and normalization approach is suggested? And which...

writexl::write_xlsx incompatibility with openxlsx

2

Hello, I have some compatibility problems between openxlsx and readxl/writexl. I read some excel sheets with 20+ alpha/numeric columns, by doing: `readxl::read_xlsx(myfile)` I manipulated the excel and then saved it...

Getting number of SNPs and SNP IDs used to assign each cell

1

Does demuxlet output the number of SNPs used to assign each cell to a donor? Is this the **N.SNP** column in the .best output file? Because often this number is...

Just make Logo plots starting from TCR data

5

Hello, I have some groups of single cell TCRs for which I would like to make Logo plots including both alpha and beta chains and the usage of V and...