Eric Audemard

Results 7 comments of Eric Audemard

If my memories are correct, I change this part of code to return the correct sequence when insertion, deletion or indel are present. example: _ _ _ _ D _...

Also have you try to scan your mutations by Chromosome? In that way the sequence should stay in cache and be loaded only one time. Something like: ``` for chr...

Even with something like : ``` for chr in genome.iterGet(Chromosome): chr_seq = chrom.getSequenceData() for snp in chr.get(dbSNPSNP): bin_seq = NucBinarySequence(chr_seq[slice(snp.start,snp.end,1))]) ... ``` It's my last suggestion to help you. I...

Hi, I have a similar issue with two nested QRouteTab component (from Quasar). Reproduction link: https://codesandbox.io/s/without-qtabpanel-m43nec If you click ont "test B" tab, the setup of test j is executed...

Here some fdrtool plots, with all samples: ![fdrtool_with_all_samples](https://user-images.githubusercontent.com/13856989/53273940-7f133a80-36c3-11e9-84e9-2a60bb274d15.png) Here some fdrtool plots, after removing 1 sample : ![fdrtool_without_sample_x](https://user-images.githubusercontent.com/13856989/53273948-8b979300-36c3-11e9-8a76-965915a3b05a.png) The null component doesn't fit at all the mixture. In that case,...

I find ../results/fin_females.RData in the bioRxiv branch. But it's steal missing fastq files, to create finn_samples.txt. I try to fix it, but I'm steal interested by an answer, Hop-o'-My-Thumb (Little...