ericblanc20 issues

Repositories
Issues
Comments

Results 3 issues of


                                            ericblanc20

fix: escaped equal sign in INFO fields

The change made escapes equal sign (`=`) in INFO fields. However, the column characters `:` are also escaped on output, as recommended by the [vcf 4.3 format](https://samtools.github.io/hts-specs/VCFv4.3.pdf). It is unclear...

The equal sign is not escaped in output

* vcfpy version: 0.13.6 * Python version: 3.10.13 * Operating System: Rocky Linux 8.7 (Green Obsidian), Linux 4.18.0-348.2.1.el8_5.x86_64 ### Description Escaping the equal sign `=` in INFO fields is lost...

invalid class “GFF2File” object

Hi, I get an error trying to read gif files using `rtracklayer::import(< gtf file>, format="gtf")`. The same error occurs when I don't specify the format. ``` > library(rtracklayer) > rtracklayer::import("test_file.gtf",...