Erdal Karaca

Results 12 issues of Erdal Karaca

A while back in the discord bids channel some contributors discussed about a lightweight BIDS I/O library to integrate into nilearn. We have developed such a lightweight library at the...

BIDS

I have a custom binder that uses jquery on(...) events binding. The binder works as expected in Opera but fails in other browsers. First, I thought this might be a...

Dear JOSS editors, Within the [ANCP Lab](https://uol.de/en/applied-neurocognitive-psychology) we have been working on a [Python package](https://github.com/ANCPLabOldenburg/ancp-bids) to read/write/query/validate [BIDS](https://bids-specification.readthedocs.io/en/stable/) datasets. We intend to [merge it back](https://github.com/bids-standard/pybids/pull/863) to an [existing package](https://github.com/bids-standard/pybids) with...

In agreement with @gkiar, the following approach allows for a better migration to pybids-core: - introduce a new interface BIDSLayoutV2 which uses ancpBIDS to mimic functionality from the BIDSLayout legacy...

In one of the unit tests, a `BIDSLayout` is created using a derivative path: ``` def test_dataset_missing_generatedby_fails_validation(self): dataset_path = Path("ds005_derivs", "format_errs", "no_pipeline_description") with pytest.raises(BIDSDerivativesValidationError): BIDSLayout(Path(get_test_data_path())/dataset_path) ``` The expectation is to...

Hi, I cannot extract a reproducible example to prove this, but just by including the publisher bundle in my (Eclipse) product and launching it, the OSGi runtime complains: `Getting a...

Hi, Is there an OSGified version of the GeoScript JS library? I would like to integrate it into Eclipse, more specifically provide it as a module to the EASE (eclipse...

When opening an archive to append a directory (recursively) an exception is raised: ``` Traceback (most recent call last): [...] File "C:\Program Files\ArcGIS\Pro\bin\Python\envs\arcgispro-py3\lib\site-packages\py7zr\py7zr.py", line 410, in __exit__ self.close() File "C:\Program...

Currently, the schema consists of a mix of ad-hoc definitions and syntax. This makes it hard to implement a tool to generically validate a given BIDS dataset. In the ancpbids...

schema

Not sure if I miss something, but it seems to me that NIR is not considered to also represent a trained model, just its architecture, i.e. no model coefficients (and...