socialmixr
socialmixr copied to clipboard
epiforecasts
R package for deriving social mixing matrices from survey data.
@sbfnk, do you remember why you bumped the minimum required R version to 3.5.0 in https://github.com/epiforecasts/socialmixr/commit/5a92b5067bc0b09d445e56424623811a1aed08b0?
Targeting #71 for clarity but could be merged into `main` directly. Just needs a `NEWS` item. Co-authored-by: Sebastian Funk
`socialmixr` masks `devtools::check()` and `utils::cite()`. It may be worth considering renaming for user friendliness. Explicit possibilities... `check_survey`, `cite_survey` / `get_citation()` / `get_survey_citation()`.
The following code was filling my entire RAM because of `allow.cartesian = TRUE`. ```r f
This is a space to gather issues with the data files to help the maintainers of the [Social contact data community on Zenodo](https://zenodo.org/communities/social_contact_data/?page=1&size=20) keep track. If you spot any issue...
The documentation for `columns` states: > if given, a named character vector containing the name of the "id", "participant.age" and "contact.age" columns But the value of this argument is never...
It is generally considered good practice for package that interact with API or do webscraping to have a custom user agent. This would allow zenodo maintainer to know which requests...
I think the different packages fill different niches and it's good to keep them all alive (especially since they are already on CRAN). However, we should make sure that they...
As @sbfnk mentioned, it would be useful (and polite) to cache surveys downloaded from zenodo instead of re-downloading them each time the code is re-run. The simplest option is probably...
Survey data are often truncated, e.g. POLYMOD has different levels of truncation for individual listing of contacts by country/setting. Where the total number of contacts are reported, it would be...
Metadata
Owner
Metadata
R package for deriving social mixing matrices from survey data.