在阿拉斯加逮企鹅
在阿拉斯加逮企鹅
> Thank you guys! I solved my problem. I believe the problem is (py)torch version, and mamba/conv1d don't support 2.3.0 yet.(check Dao's response in Issue #217) > > My problem:...
Hi, This part of embedding I can given you in the next few days. But the structure module's parameter does not be finetuned. I don't know whether this embedding after...
Hi, The embedding has been uploaded to https://drive.google.com/drive/folders/19lPfA_pNelKHdkIIUXtv_IZ-1U018l_F.
Hi, empyriumz: Metal ion binding dataset collected from PDB(https://www.rcsb.org/). If the protein has any Metal ion binding site, we set its label as 1.
We wrote a crawler to crawl the annotations of each PDB protein. Do you need the original dataset we collected?
I am so sorry that the classmates who wrote the crawler are not on the author list and are unwilling to give it to us. They now have a job...
> Hi, I try to use your metal alphafold code to predict other protein features, but I find that your code use a pkl data as the input, so I...
> > > > Thanks for your answer. I also have a question, I saw that you use Evofomer and ESM to predict protein SS. But I don't see these...
> > > > Thanks for your answer. I also have a question, I saw that you use Evofomer and ESM to predict protein SS. But I don't see these...
> > I see, thanks for the answer. I used merge_msa.py but it didn't work, can you show me a case how to use it? Hi, I have added an...