Chris Markiewicz
Chris Markiewicz
My first guess would be an issue with the masking process interacting with a limited field-of-view scan. If you send me an example subject (just one bold run) that reproduces...
This is ready to go. Reviews welcome, or else will merge on Thursday, Feb 20.
Yes, a PR would be helpful. Do you know what versions of ECAT your files are? This might need to change based on the version.
Huh, that's some bug. ```py In []: import nibabel as nb In []: img = nb.load('Downloads/test.nii.gz') In []: nb.aff2axcodes(img.affine) Out[]: ('I', 'A', 'R') In []: ras = nb.as_closest_canonical(img) In []:...
PRs are welcome. A fix should come with a regression test that fails prior to the fix and passes after. If you want to use a small test file (you...
ICA-AROMA was removed from fMRIPrep. See https://github.com/nipreps/fmripost-aroma/ for running AROMA. Does the curvefit issue still reproduce in 25.0.0?
So it looks like it's using the monoexponential curve fit method. Any remaining issues?
If you're still seeing issues on 25.2.0, could you share a subject with us?
The curvefit issue is resolved. Please open a new issue with the specific problem you're seeing with surface sampling.
What would your proposed API be?