Chris Markiewicz
Chris Markiewicz
Regarding `phenotype`, pulling it out of the primary dataset seems to run counter to BEP36, which aims to put additional constraints on phenotype. Because many of those rules hinge on...
Even easier: ```py for file in path.rglob('*.nii.gz'): img = nb.load(file) # Write gzipped header for .nii.gz files with gzip.open(file, 'wb') as f: img.header.write_to(f) ```
Sounds great! I would look into the `--format json_pp` output and verify this metadata is in the summary object, or else add it. I would then include this as part...
In the above cases, I'm not changing any types, except `abs_fn`, since it is immediately converted back to a `str` with `os.fspath()` in the return statement. I assumed a round...
@AA-Turner I'm running into this issue again. What do you think about the `normalize_path(path: Path) -> Path` approach above?
I think this is fixed in `master`. I'll queue up a release in the next week.
As far as the schema and validator are concerned, the "sidecar" is the collection of keys and values aggregated through the inheritance principle. So I would say a sidecar file...
That's supposed to be detected automatically. You can force it with NO_COLOR=1.
Looks like we can use `Deno.stdout.isTerminal()` to make sure that colors are turned off. ``` echo 'Deno.stdout.isTerminal()' | deno -q | cat false echo 'Deno.stdout.isTerminal()' | deno -q...
I'm kind of a toss-up on interpolating `subCode`. Could be useful, but I don't see an immediate use case. Worth noting that `affects` is a list, which makes it a...