Eduard Casas
Eduard Casas
@nf-core-bot fix linting
@nf-core-bot fix linting
The linting really is giving me a hard time lol
Tests 2 for conda, singularity and docker show different snapshots for the 'latest' version vs the 25.04, unsure why.
> The changes in nf-test.config is something that needs to be double checked. Removed and added to specific subworkflow tests directives!
The Channel.empty() works with my tests, the mentioned [[:], [] ] did not, so I kept as it. Thanks again for your time and review.
@Joon-Klaps any thoughts on the state of the branch?
> @eduard-watchmaker, seems like the gpu snapshot files are still empty. This is likely becuase you've provided `Channel.empty()` as an input. Whenever a nextflow process recevies an `Channel.empty()`, it doesn't...
> Ah yes the bwa/index issue I suspect. See github.com/[/issues/9230](https://github.com/nf-core/modules/issues/9230) for the ongoing discussion. I assume these tests were running on the original version of fq2bam? Unsure why they are...
Very unsure about what is going on with the singularity / apptainer profile here, any thoughts @famosab @Joon-Klaps ?