Edmund Miller
Edmund Miller
This might get us started though https://github.com/marketplace/actions/author-to-codeowners
I think this needs to be autogenerated at this point with `nf-core tools`
@chris-cheshire I help @tkhalilullah when he wrote this module, so I was just adding myself as someone to fix any major errors. Please review it!
https://github.com/dorny/paths-filter/issues/156
I think we should use the class diagram https://mermaid-js.github.io/mermaid/#/classDiagram
Going to have to manually add the `README.md` file for now. https://github.com/nf-core/modules/pull/2217#issuecomment-1274560734 we should add the README creation with a mermaid template to `nf-core subworkflow create`
> This would be nice. We just need to make sure we lint to check that the mermaid diagram has always been generated relative to the latest version of the...
```mermaid graph TD A(HOMER_MAKETAGDIRECTORY) -->|tagdir| B(HOMER_MAKEUCSCFILE) A -->|tagdir| C(HOMER_FINDPEAKS) C -->|txt| D(HOMER_POS2BED) subgraph ide1 [emit] A -->|tagdir| t(tagdir) B -->|bedGraph| b(bed_graph) C -->|txt| p(peaks) D -->|bed| e(bed) end ```
``` Unable to find image 'public.ecr.aws/biocontainers/mulled-v2-ffbf83a6b0ab6ec567a336cf349b80637135bca3:676c5bcfe34af6097728fea60fb7ea83f94a4a5f-0' locally docker: Error response from daemon: repository public.ecr.aws/biocontainers/mulled-v2-ffbf83a6b0ab6ec567a336cf349b80637135bca3 not found: name unknown: The repository with name 'mulled-v2-ffbf83a6b0ab6ec567a336cf349b80637135bca3' does not exist in the registry with...
> My suggestion is to use a profiles to set a parameter to supply the container registry and then simplify the ternary expression. This is definitely the cleanest. I think...