Eaton Lab

--nofiles option only prints params but not tree/s to terminal

1

Hi Team, The raxml-ng docs describes the `--nofiles` action as `do not create any output files, print results to the terminal only` However, the results printed to the terminal seem...

Bring back the alt method for copy for large trees to avoid recursion error.

Consensus tree function should not only record consensus topology and get support but could also get branch length information. This is a bit complicated and their are different methods for...

The i5 tags are being stored now. At step 3 it should dedup so that the stacks used in steps 4-5 are corrected. And store stats on deduping in the...

global trimming trims too much when combined with quality pruning for SE data

1

Here is a simple example to demonstrate. The sequences are high quality and so will not be pruned for quality, but I wish to trim the first 6 bases. The...

Changes to `tip_labels_style['font-size']` do not show in MultiTree drawings.