Bryn Lloyd

Deprecate arguments

3

This is a feature idea, not a bug report. It would be great if `deprecated` could warn about deprecated arguments, e.g. like ``` @deprecated_arg(name="old_arg_name", since="1.2", version=mypackage.__version__, reason="'old_arg_name' is not consistent...

Enable MKL Sparse QR solver as alternative to SuiteSparse

5

Building ceres on Windows and getting good performance is not very well supported, because there is no (maintained) way to build SuiteSparse. Please support the MKL Sparse QR, described here:...

WIP: extend nglib api

3

This is work in progress. I am still in the process of testing the api. The api changes are backwards compatible, i.e. new arguments are optional. Please feel free to...

Netgen uses global static instances to store the meshing parameters, and process information, e.g. to terminate the task (netgen::multithread.terminate). This design makes it dangerous/error prone to use Netgen functionality simultaneously...

Is there any way to get matrix / Affine transform from sitk.CompositeTransform?

2

Assuming I have a chain of linear transforms inside a `sitk.CompositeTransform`, is there any way I can get the total affine matrix? Example: ``` tx1 = sitk.ScaleVersor3DTransform() tx2 = sitk.AffineTransform(3)...

Support image1 * image2 for different pixel types

2

Often it is convenient to multiply one image by another, e.g. to mask a segmentation or MRI. Currently, SimpleITK rasies an exception if the pixel types are different. It would...

Recently `pathlib.Path` support was added for `ReadImage`. https://github.com/SimpleITK/SimpleITK/blob/ac3afb935291dc7830f370cb89ba54dea8e6d525/Wrapping/Python/SimpleITK/extra.py#L346 It would be great if this could be extended to similar functions, like `ReadTransform`

stack-buffer-overflow in fast_expansion_sum_zeroelim

3

I found this issue in the original predicates code, and can reproduce it also in your code (or in my fork of your repo): https://travis-ci.com/github/dyollb/predicates/jobs/353312903 1: ==5947==ERROR: AddressSanitizer: stack-buffer-overflow on...

How to Resolve Merge Conflicts in DVC Metafiles, issue

3

### Report The following command lines are suggested in the section `How to Resolve Merge Conflicts in DVC Metafiles`. ```sh git config merge.dvc.name 'DVC merge driver' git config merge.dvc.driver \...

Python Documentation bug in sitk.Image constructor

4

**Describe the bug** The documentation of `SimpleITK.Image` in the python API says ```py """ img: After the operation img is valid only for destructing and assignment; all other operations have...