David L. Tabb

Need to read deconvoluted RAW built by FreeStyle

11

Hello, I am deconvoluting inclusion-list and targeted RAW files for top-down proteomics. FreeStyle 1.8's "Xtract All" feature creates a new, deconvolved RAW from a larger input RAW. Unfortunately I cannot...

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1

Hi, all. I have reproduced a problem when I run the 1.1.8305 release on my test file. My script for execution looks like this: ``` "C:\Program Files\Informed-Proteomics-1.1.8305\ProMex.exe" -i 20151116_F_MaD_Ecolik12pool_ACNplate_ET5hcD10_01bis.raw "C:\Program...

### What is the QC term's name? The range of peak count medians among isolation windows ### Briefly describe the QC term. For each isolation window, we compute the median...

### What is the QC term's name? Range of TIC sums among isolation windows ### Briefly describe the QC term. Because isolation windows measure different m/z regions, the TIC for...

### What is the QC term's name? Range of retention times at half TIC among isolation windows ### Briefly describe the QC term. The halfway point for collecting TIC along...

### What is the QC term's name? range in count of MS/MS measurements per isolation window ### Briefly describe the QC term. The number of times each isolation window in...

### What is the QC term's name? Range of m/z widths for DIA isolation windows ### Briefly describe the QC term. If we subtract the low m/z bound of an...

### What is the QC term's name? number of isolation windows in DIA method ### Briefly describe the QC term. How many distinct isolation windows (sharing the same low m/z...

### What is the QC term's name? median cycle time between measurements ### Briefly describe the QC term. In the vector of times elapsed between successive scans of this type,...

### What is the QC term's name? TIC Quartile Retention Time ### Briefly describe the QC term. This metric records the amount of time elapsed since the start of the...