Diedre Carmo comments

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                                            Diedre Carmo

fix deprecated ops in pytorch 1.6

Hello! Does this change cause any problems? Is there any reason why its not merged yet?

First time training, HTTP Error 403: Forbidden?!

Same problem. Just created a pull request to fix the links.

Image size

The segmentation head expects big images (from datasets like Cityscapes). Check the LRASPP implementation in the paper. I was able to fix this by using AdaptiveAvgPooling instead of AvgPool in...

RuntimeError: Given input size: (576x48x48). Calculated output size: (576x0x0). Output size is too small

I was able to fix this by using AdaptiveAvgPooling instead of AvgPool in the LRASPP implementation.

matio not found for Lua 5.3 5.2 5.1

same problem for lua 5.1

RuntimeError: Given input size: (576x48x48). Calculated output size: (576x0x0). Output size is too small

> @dscarmo what did you pass in as your output size for the AdaptiveAvgPooling parameter? To get a single value for each channel you need to pass 1

own images pre-processing

@taigw I have run your method and the results don't look good in my test set without the cropping to the lung region, but I don't have a way to...

Methodology to use tree evaluation functions (BD/TD)

@Puzzled-Hui Sorry, I think I didn't express myself clearly. I meant the inputs of the BD and TD functions require the airway skeleton. I am applying these functions to a...

Methodology to use tree evaluation functions (BD/TD)

@Puzzled-Hui thanks for the clarification. One last question. I noticed the tree_parse code has a largest connected component computation. Therefore, can I use predictions that are not the largest connected...

PDF wont load orthanc with ohif setup

I have similar issues when using orthanc with ohif plugin behind an nginx proxy. Things that I found in the web such as changing configs singlepart, acceptheader, datasources in ohif...