Tim Downing

icon indicating a website link https://cosmogenomics.wordpress.com/ icon indicating an email [email protected]

icon company Pirbright Institute icon location Surrey, UK icon location Dr Tim Downing is Head of Genomics and works on a range of viral pathogens and associated host species. I wish GitHub didn't keep changing its structure so much

Results 3 comments of Tim Downing

00h00m00s 0/0: : ERROR: [Errno 2] No such file or directory: 'start'

Hi 6br, I tried that but I still get errors: downing@login1:~/MoMI-G$ yarn 00h00m00s 0/0: : ERROR: There are no scenarios; must have at least one. downing@login1:~/MoMI-G$ yarn start 00h00m00s 0/0:...

00h00m00s 0/0: : ERROR: [Errno 2] No such file or directory: 'start'

Thanks, yes it appeared to require extra dependencies but is working now.

Poly A trimming doesn't work

I have this issue as well, fastp appears to perform poorly on sequences with high rates of polyA and polyT tracts. cutadapt was the only way I could address this.