dorianps

Travis down?

5

I noticed that Travis-ci.org is not working anymore for LINDA and LESYMAP. Looks like travis-ci.org, which was free , has stopped working in June 2021 and asking users to use...

Parallelizing permutations with `foreach` ?

3

I am trying to build a parallel routine to run some permutation analysis. When done on a serial manner, each permutation updates a single variable which keeps count of how...

Sometimes the overlay image might be an empty image. When plot is attempted in that case, there is an error. ``` > img = antsImageRead('ch2.nii.gz') > imgempty = img*0 >...

All calls inside `antsBrainExtraction.sh` have verbose enabled. It might be a good idea to add `-v` option to set verbosity to off. This is helpful when the script is called...

Add lesion mask argument to antsBrainExtraction

1

Currently `antsBrainExtraction.sh` uses SyN registration This creates some problems in brains with stroke (or other lesions), because the deformation of the lesion causes some of the brain mask to go...

Cannot get data - [WARNING] Could not detect whether origin carries an annex.

35

We are having a strange problem on the server. User A has troubles to get the data from a dataset freshly installed from User B within the same machine. Here...

Does `datalad container-run ... participant` without specifying a `--participant-label` process all subjects? And does it create the bids folder structure in the output folder (i.e., sub-* folders)? I ran mriqc...

I have three Google TV at home. For some reason, the YouTube button works great to open SmartTube on two of them, but the most recent one I installed few...