Zhuoer Dong

I suggest that you read [this article](http://r-pkgs.had.co.nz/description.html#dependencies), in summary > `Imports`: packages listed here must be present for your package to work. > `Suggests`: your package can use these packages,...

Me too. Though I found it's probably `self.calculate_differentiable_score()`

R包中的所有R代码都是完全开源的，估计也没人开发加密工具。你可以考虑Rcpp，部分关键代码用C++实现。

博人传动画都出了

I also came into the same problem. The [official wiki](https://github.com/soedinglab/MMseqs2/wiki#expanded-cluster-searches) says:  However, there were no further explanation until now.

Thank you, but I haven't developed Chrome extension before.

可以谈一下如何用Intel Math Kernel Library替换R自带的BLAS/LAPACK库，尤其是矩阵运算，速度飞起啊

https://software.intel.com/en-us/articles/using-intel-mkl-with-r