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Easily construct the ML species tree with single-copy gene shared by different species.

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hi, I'm sorry to bother you. I've just started using this script and it's very useful. But I met an error when while running run_example.sh on the data in example....

All the pep files are result of Transdecoder, then I clean the id of the sequence. But when I run the script, all the files of SigleGene are empty files....