Daniel Bauer

Results 11 issues of Daniel Bauer

The current implementation of `AsyncRequest#getDto()` takes a generic parameter to specify the return type of the method. This makes it impossible to see what `asyncRequest.getDto()` is actually returning. It could...

question

The pdb specification allows pdb files with multiple different models. biotite can read these files, but there is no way to write them.

enhancement

The current implementation of various functions (i.e. RDF) uses a cell list approach to calculate distances between two selections. However, this approach tends to be very slow for some edge...

enhancement

With the current CWL definition, there is quite some unnecessary redundancy between the workflow .cwl files and .yml configs. Let's look at an example: reader.cwl ```cwl #!/usr/bin/env cwl-runner label: Printing...

The owner of this repository hasnt updated Packegist for quite a while. With no way to get in touch with him and no ability to update packegist to new versions,...

wontfix

The repository didnt upgrade for some time. Its still stuck on 0.6.2 while the current version it 0.6.4 (see #110). Can you please update this @paquettg ?

enhancement

Currently, rye defaults to adding itself to the `PATH` by a line in `.profile`. However, this does not work if the user is using ZSH because ZSH does read from...

PEP440 defines the versioning of python dependencies. I suggest to implement `rye add dependency` to follow this specification and allow to add packages in the following formats: ```bash # no...

Adds the footprint of the popular Nice!View eInk display. It is very similar to a standard oled, but features an additional pin, so it is based on the `oled.js`. I...

There seem to be a breaking change in pymbar because the calculation fails with the newest version and the following error: ``` python Traceback (most recent call last): File "/home//.local/bin/alchemical_analysis",...