Dorota Jarecka

Results 58 issues of Dorota Jarecka

When working with schemasheet I noticed that I can't really use "name" slot in `slot_usage` (e.g. to add more specific `description`). I believe this is removed in [schema_as_dict](https://github.com/linkml/linkml-runtime/blob/54036129f827f03ad28120f9bdffdfb4aac1d21d/linkml_runtime/utils/schema_as_dict.py#L70). Is it...

question
community-generated

I would like to use both `slots` and `attributes` in one schema. I was having issue with creating `attributes` column (see linkml/schemasheets#128 ), but I found a cli option `--use-attributes`,...

enhancement

I want to create exact mapping from the column, but in order to do it, I have to: - add prefix - replace spaces with "%20". I found an example...

I can't find the docker image you mention in the documentation: `linkml/schemasheets`

I've tried to use the `sheets2linkml` with the example of [gsheet you provide](https://docs.google.com/spreadsheets/d/1wVoaiFg47aT9YWNeRfTZ8tYHN8s8PAuDx5i2HUcDpvQ/edit#gid=55566104), but I get the error: ``` (models_linkml) MacBook-Pro-2:linkml dorota$ sheets2linkml --gsheet-id 1wVoaiFg47aT9YWNeRfTZ8tYHN8s8PAuDx5i2HUcDpvQ personinfo types prefixes -o personinfo_gsh.yaml...

I've moved the tests to Github Action. I've started changing the code to work with python3.7, but I've realized that I'd have to change also NIDM Results repo, so perhaps...

small edits to emphasize some possible issues with downloading data.

I've realized that the notebook `10x_snRNASeq_tutorial_part_2a.ipynb` doesn't run correctly. The cell 10 with "create empty gene expression dataframe" raise an error, since some files are missing. I was able to...