Benjamin C C Hume

container upgrade request: mothur

3

Hi there, Thanks for your work. Would it be possible to upgrade the biocontainer's mothur image to a new version. The 1.41 version you currently have available has some annoying...

genome requirement with --pseudo_aligner salmon and --skip_alignment

5

## Check Documentation I have checked the following places for your error: I have checked both of these and looked through the introduction to see which steps might require the...

fix compilation errors on modern g++/c++ compiler (Ubuntu 20)

1

These changes fix the compilation errors that occur on running make (e.g. #19) using new compilers such as those found on Ubuntu 20. I successfully compiled with: `g++ (Ubuntu 9.3.0-17ubuntu1~20.04)...

ERROR: max count before zero is less than min required count (4) duplicates removed

2

Running preseq from the latest release [preseq-3.1.2.tar.gz](https://github.com/smithlabcode/preseq/releases/download/v3.1.2/preseq-3.1.2.tar.gz) lc_extrap give the following error: ``` Singularity> preseq lc_extrap -P scaf1.1m.bam ERROR: max count before zero is less than min required count (4)...