charcoal icon indicating copy to clipboard operation
charcoal copied to clipboard

look into mmseqs2 for validation and maybe addition

Open ctb opened this issue 5 years ago • 0 comments

riffing off of conterminator, martin steinegger suggested that we look at using mmseqs2:

We have a method in MMseqs2 to predict a consensus taxonomical label for a
contig by considering all ORFs that match to homologous sequences in a reference database.

this doc page appears to be the right place to reference: https://github.com/soedinglab/mmseqs2/wiki

ctb avatar May 29 '20 13:05 ctb