David Depierre

Error: no matching usb device found while running ./dtdump

1

Hi, First I want to thank you for this OB ! It sounds great but I wish I could ear it. Install it went well with no error, my digitakt...

Hi Deeptools team, After all these years using Deeptools, I am still confused with some BamCoverage options for reads processing (extend, center, mnase, offset...), specially when it comes to combine...

Downsampling and cis counts

2

Hi, A part of this bug has already been reported [here](https://github.com/open2c/cooltools/issues/377), I have the same issue on cooltools 0.5.4 version. Also while writing this issue, I realized I had maybe...

Hi higlass team, I have got a issue using 2d-rectangle-domains datatype, is there a way not to fill rectangles? I though Opacity 0% would do it but apparently it is...

Permission errors with docker while launching higlass-manage

3

Dear higlass team, I followed instructions to install higlass-manage: Prerequisites: ``` $ python3 --version Python 3.10.6 ``` Docker installed following https://docs.docker.com/desktop/install/ubuntu/ and I can launch Docker desktop ``` $ docker...

About singletons

1

Hi Felix, It's unclear for me how singletons are handled by SNPsplit. So far I understand it, singletons are cases when only 1 read of the pair is properly aligned...