David C Danko

Results 10 comments of David C Danko

Thanks, I just tried with dvc 2.18.1 and the error persists

I don't think there was anything special in how we set them up. I specified a shared cache and users used dvc add/pull to add or load files. All of...

some similarities to @iddqdiddqd - one of our remotes was an s3 bucket mounted as a filesystem using s3fuse. - when I run `gc` as sudo I get a different...

I'd like to note I am getting a similar error message. Command: ``` $ krakenuniq-build --db DB --taxids-for-genomes --taxids-for-sequences --threads 6 --kmer-len 31 --max-db-size 80 2> foo Kraken build set...

Seems to be related to this issue. Got this by calling `list()` on the generators. Tensorflow version is the same listed on the README ``` Succesfully read previously calculated kmer...

Going through this more thoroughly I believe this issue is similar to Issue #6 Manually inspecting the checkpoint files suggests that the layers in the files are named `hiddenlayer_0/biases` without...

@daavoo unfortunately I still am having this issue, any more info I can provide?

Fairly certain that's not the issue. The machine in use has a terabyte of RAM.

This issue is caused by 'fixing' the spaces in coarse.fasta (#5) This fix breaks the index of coarse.fasta. I do not have a fix for coarse.fasta.index yet