Dmitry Bolotin
Dmitry Bolotin
After https://github.com/milaboratory/milib/issues/36
Like: ``` -OvParameters.kAligner1.mapperKValue=12 ``` ``` -OvParameters.alignerType=kAligner1 ```
Add option to limit possible substitution/index positions on clusterization step by positions with low aggregated sequence quality.
Add well defined sections: - MiXCR Pipeline - Overview - Align - Assemble partial alignments - Assemble clones - ... - Auxiliary MiXCR Action - alignmentsDiff - exportAlignemntsPretty - ......
My test showed that `rna-seq` parameters performs slightly better on real highly enriched datasets. While I expected the opposite effect. MiXCR with this parameters has nearly zero false positive rate,...