Dan Birman

Same issue on Windows 10 Python 3.9.10 jupyterlab 3.3.0 Temporary workaround that is working for me is to simply open jupyter lab in a higher directory. If I start running...

Related to https://github.com/brainglobe/brainglobe-atlasapi/issues/240 (discussion of issues w/ normals in the CCF)

Okay so if I understood right you don't have Neuropixels probes in your library because you generate them dynamically from the imro files, since you are mostly interested in the...

No worries. I have these files for NP1/NP2 probes, not for any of the more atypical varieties (like ultra, etc). NP1 is above, here's the NP2 file: [neuropixels_2.csv](https://github.com/SpikeInterface/probeinterface/files/11658797/neuropixels_2.csv). This defines...

I didn't end up working more on this, although I do want to find a solution for easier importing of probes into Pinpoint. The probeinterface_library repo doesn't seem to be...

Thanks for the detailed explanation. Option 1 seems best, if someone ever implements 3 then the exposed property could be removed. I might still be misunderstanding, but isn't there also...

Amazing! I'll add the human atlas and AZBA to Pinpoint then, if there's a way to be notified when the other atlases are fixed I'd appreciate it so I can...

+1 for coordinate spaces in physical units, that's a known big source of confusion/frustration!

Ah yeah -- they are being projected from above, when probably what we really want is for them to be projected perpendicular to the surface. Hmm -- I guess craniotomies...

Sorry for the delay I didn't see this issue right away. If the Paxinos atlas also has this issue it might be a real problem with the atlas. I suspect...