David Barnett

With many hundreds of ASVs and hundreds of samples, interactively selecting the unifrac distance options and clicking build appears to hang indefinitely because there is no indication to the user...

If during complex taxonomy table repairs, you want to replace unknowns, but not empty strings you cannot currently do this with tax fix The solution is probably to use NAchar...

`ps %>% tax_mutate(across(everything(), ~ gsub("^.__uncultured_.+$", "", .))) %>% tax_fix()` example thanks to Valentina

seriate samples with distance matrix that already exists in psExtra can also be used inside ps_seriate (for when distance is required for method) returns psExtra

and names in this sort order should be accessible via tax_top_ord (a sister function to tax_top)?

Thanks for creating this book/resource, I have certainly learned some great tips from it, and frequently refer others here :) To me, chapter 1.6 seems like a relevant place to...

https://github.com/david-barnett/microViz/blob/739f3881b6e841f80ef96794331f798dc5f469e2/R/ord_plot.R#L250 https://github.com/vegandevs/vegan/discussions/644 https://github.com/vegandevs/vegan/issues/647