Dan Vanderkam

BioDalliance has a mode kinda like this. What do you guys think? 

Sorry. Just added a marker to the screenshot.

This is a sneaky issue—it's actually for the VCF track, not for the pileup track. I've filed #186 for that.

browserify [automatically adds a shim](https://github.com/substack/browserify-handbook#process) for node's `process` when it detects that a module uses it. In this case, it looks like this is confusing Q.

When I point at a non-existent VCF file in the playground, I see this: That's not terrible, but it would be better if this sort of thing were surfaced in...

This is known as an [interval tree](http://en.wikipedia.org/wiki/Interval_tree). There's a [JavaScript implementation](https://www.npmjs.com/package/interval-tree) on NPM which I could either use directly or adapt for use with my `Interval` class.

one problem is that there's no such thing as a 2bit "slice" — each chromosome always starts at position 1. We could work around this by making a `ShiftedTwoBit` class...

No, I'm thinking whatever you ran to generate concordance-data.js. On Tue, May 27, 2014 at 11:11 AM, Isaac Hodes [email protected]: > Are you thinking some in the /test directory? >...

That's fine, so long as they're in a known place. I just want to be able to regenerate the data myself. But so long as the files aren't large or...

Copying over this comment from #525... In case it helps anyone else, you can lowercase all column names in a Postgres database after you import using [this magical incantation](http://stackoverflow.com/questions/10086532/how-can-i-convert-all-columns-in-my-database-to-case-insensitive/10088351#10088351) from...