Adnan Niazi
Adnan Niazi
> The histogram peak looks weird, so that hifiasm cannot find correct peaks for assembly. I'm confused why your HiFi data has such peaks. Have you check contamination? I am...
> I would make a kmer plot of your hifi data first. I think this should always be done, users should see already peaks at expected coverage prior running hifiasm....
The results from Canu assembly made me try other assemblers, and I found Hifiasm. DNA was obtained from only one individual. I am not about CLR contamination, I got only...
Thanks Guang. It is working now. However, I was wondering that regions annotated as 3UTR and 5UTR had no gene information like we get for exon and intron. Is it...
Thanks for the explanation @KatharinaHoff. Does this mean one should not use masked genome for the same reasons? I got 92% (96% Single Copy) and 86% (15% SC) from BUSCO...