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Published 20 hours ago • verified publisher icon daler

spliced sequence extraction

Open daler opened this issue 7 years ago • 2 comments

xref https://github.com/mdshw5/pyfaidx/pull/127

daler avatar Oct 11 '17 20:10 daler

Hi Ryan, I'm just hand-implementing a version of this myself. It would be more sensible to join forces and see if I can accelerate a well-tested version within gffutils.

Where are you at, how can I help? Edward

ewallace avatar Feb 05 '18 19:02 ewallace

Thanks @ewallace. This issue has been lower priority across my projects, so unfortunately I haven't made any progress. It would be great if you could add something to gffutils, and I'd be happy to help integrate and test.

daler avatar Feb 05 '18 19:02 daler